BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB021E01SP1|AL427769
(907 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1658 1719 0.0
>3x_Contig1658
Length = 13395
Score = 1719 bits (864), Expect = 0.0
Identities = 890/898 (99%), Gaps = 3/898 (0%)
Strand = Plus / Minus
Query: 1 tcyccactcagtactttgacggcagctattcagatgggttttgggtcgtcgatgatattt 60
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12429 tctccactcagtactttgacggcagctattcagatgggttttgggtcgtcgatgatattt 12370
Query: 61 caattgccgaccagcaggtcccagatctgcaatttgcagttgctaatatatcaagtgctc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12369 caattgccgaccagcaggtcccagatctgcaatttgcagttgctaatatatcaagtgctc 12310
Query: 121 catcaggtgtactaggtgtgggacttcctagactggaagcagttcgtggatacgatggag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12309 catcaggtgtactaggtgtgggacttcctagactggaagcagttcgtggatacgatggag 12250
Query: 181 cccccaatgcgaattacgataactttccgcagacactgaaaagtaatagattgatcaata 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12249 cccccaatgcgaattacgataactttccgcagacactgaaaagtaatagattgatcaata 12190
Query: 241 gggtgttgtactcgttgtatttcgatagtggagacctagaaagtggaacagtgctcttcg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12189 gggtgttgtactcgttgtatttcgatagtggagacctagaaagtggaacagtgctcttcg 12130
Query: 301 gaggtatcgatgagaaaaaatacgatggtgtgctgtatactttgccattagtcaatatat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12129 gaggtatcgatgagaaaaaatacgatggtgtgctgtatactttgccattagtcaatatat 12070
Query: 361 atgawcagattgatgaacccgctgcttttgatatcactttacaaggacttggaataagaa 420
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12069 atgaacagattgatgaacccgctgcttttgatatcactttacaaggacttggaataagaa 12010
Query: 421 gtgaatcgaattgtaaagatactgtcatcgcgcataawaaggccccagcactacttgatt 480
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 12009 gtgaatcgaattgtaaagatactgtcatcgcgcataaaaaggccccagcactacttgatt 11950
Query: 481 ctggtagtacaatcatgggagctcctcaagaggcactagaaagtattgcccaagaactgg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11949 ctggtagtacaatcatgggagctcctcaagaggcactagaaagtattgcccaagaactgg 11890
Query: 541 gcgctgcattctcggaaagcgacgggttgtatgtgttagattgcccagcatccaatgatg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11889 gcgctgcattctcggaaagcgacgggttgtatgtgttagattgcccagcatccaatgatg 11830
Query: 601 atcgcacattttatttcgatttcggtgaattgaaactgaaagtgccaatacatgacctct 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11829 atcgcacattttatttcgatttcggtgaattgaaactgaaagtgccaatacatgacctct 11770
Query: 661 tatatctacctgaatccggtcagaattattgtgggttggcaataattgcgagtggcgaag 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11769 tatatctacctgaatccggtcagaattattgtgggttggcaataattgcgagtggcgaag 11710
Query: 721 agtggatcctgggggatcttgttttgaaaagcgcatatgtagtatatgaccttgataact 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11709 agtggatcctgggggatcttgttttgaaaagcgcatatgtagtatatgaccttgataact 11650
Query: 781 tggagatctctattgcccaggtaaaaaccacgagcgggtcaagaatacaaacagtaagtg 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11649 tggagatctctattgcccaggtaaaaaccacgagcgggtcaagaatacaaacagtaagtg 11590
Query: 841 c-amaggctctctgcctcaaactag-aaatcaaattcta-cccctggagtctgtytgg 895
| | ||||||||||||||||||||| ||||||||||||| |||||||||||||| |||
Sbjct: 11589 caacaggctctctgcctcaaactagaaaatcaaattctaccccctggagtctgtctgg 11532
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5084
Number of Sequences: 1807
Number of extensions: 5084
Number of successful extensions: 24
Number of sequences better than 1.0e-20: 1
length of query: 907
length of database: 10,358,551
effective HSP length: 16
effective length of query: 891
effective length of database: 10,329,639
effective search space: 9203708349
effective search space used: 9203708349
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.4 bits)
S2: 50 (100.0 bits)